FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001880185

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880185
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2970879
Sequences flagged as poor quality0
Sequence length250
%GC54

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC39884813.425252256991953No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC2081017.0046945701928625No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCACTGTCCC1105963.722669284073838No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC928983.126953336032871No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGATGACCGTGGTCCC799922.69253645133309No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCACTGTCCC592551.9945275455513334No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC488651.6447994011200051No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGATCC419391.411669744880219No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGATGACCGTGGTCCC416401.401605383457219No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGAGACCCGGGCTCC282330.9503248028613754No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGATCC215520.725441864175552No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAAAGACGGTGACCATTGTCCC215330.7248023228142243No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGCTCC178480.6007649587882913No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACCAGGGTTCC156130.5255346986531595No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC154340.5195095458280192No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGAGACCCGGGCTCC148080.4984383409758526No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTGAGA144260.48558019360600013No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC123800.41671168701249695No Hit
AAGACCGATGGGCCCTTGGTGGAAGCCGGGGAGACGGTGACCAGGGTTCC119010.4005885126927082No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAAAGACGGTGACCATTGTCCC113830.383152595578615No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC103360.3479105005622915No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGCTGTCCTTGGTCCTGGCTGAGA90100.30327724555594493No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGCTCC86960.2927079830582127No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACCAGGGTTCC80890.27227631956737386No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC79990.2692469131189793No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTGAGA76780.2584420301197053No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGCTGACCGTGGTCCC76310.2568600067522104No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACGAGGGTTCC74800.25177733593323726No Hit
AAGACGGATGGGCCCTTGGTGGAAGCCGGGGAGACGGTGACCAGGGTTCC62150.2091973452974692No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC60860.20485519605477032No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAAGAGACGGTGACCACTGTCCC58540.1970460594322421No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC52460.17658073586975437No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTTCC52190.175671913935236No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC52130.17546995350534303No Hit
AAGACCGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC49540.16675199494829643No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGCTGTCCTTGGTCCTGGCTGAGA45510.15318698607381856No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGTGACGGTGACCAGGGTTCC44240.14891215697441734No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGACGACCGTTGTCCC44160.1486428764012267No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC41340.13915073619625706No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGCTGACCGTGGTCCC39720.13369780458914685No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACGAGGGTTCC38060.1281102326954413No Hit
AAGAGCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC37810.1272687309042206No Hit
AAGACCGATGGGCCCATGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC31250.1051877239025891No Hit
AAGACCGATCGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC30110.10135047573462265No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAAGAGACGGTGACCACTGTCCC30050.10114851530472968No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)