FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001880187

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880187
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4654672
Sequences flagged as poor quality0
Sequence length250
%GC53

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC49909310.722409656362467No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC2629415.6489694655176566No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC2566285.513342293506395No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCACTGTCCC1778893.82173008108842No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGATGACCGTGGTCCC1660713.567834640120722No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC1350252.9008488675464137No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCACTGTCCC937472.0140409463867703No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGATGACCGTGGTCCC838291.8009647081469973No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGAGACCCGGGCTCC646091.3880462468676633No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAAAGACGGTGACCATTGTCCC587791.2627957458656591No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACCAGGGTTCC543911.16852487135506No Hit
AAGACCGATGGGCCCTTGGTGGAAGCCGAGGAGACGGTGACCTGGACTCC375700.8071460244674598No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGAGACCCGGGCTCC334180.7179453246114871No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAAAGACGGTGACCATTGTCCC309160.6641928797560817No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGACGAGACGGTGACCAGGGTTCC285840.61409267935528No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC284010.6101611456188535No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCGTGGTCCC269820.5796756463183658No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACCAGGGTTCC269300.5785584891910751No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGATCC248390.5336358823994473No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACTACTGTCCC206150.4428883495979953No Hit
AAGACGGATGGGCCCTTGGTGGAAGCCGAGGAGACGGTGACCTGGACTCC190660.40960995747928103No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGCTGACCGTGGTCCC160650.34513710096006767No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGGGGAGACGGTGACCAGGGTTCC151110.324641564432467No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGACGAGACGGTGACCAGGGTTCC146430.3145871502868516No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCGGAGACAGTGACCAGGGATCC138770.2981305664502246No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCGTGGTCCC138320.2971637958593001No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC134350.28863473086825453No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGATCC126650.2720922118679899No Hit
AAGACCGATGGGCCCTTGGTGGAGGTTGAAGAGACGGTGACCGTGGTCCC122190.262510441122382No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACTACTGTCCC108120.23228274731280746No Hit
AAGACCGATGGGCCCTTGGTGGAGGCGTTAGAGACGGTGACCATTGTCCC103340.22201349525809766No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGCTGACCGTGGTCCC79700.17122581354819416No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGGGGAGACGGTGACCAGGGTTCC79500.17079613773000546No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGCGGAGACAGTGACCAGGGATCC73350.15758360632070315No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC65290.14026767084769884No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC64020.13753922940220062No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC61500.13212531409302308No Hit
AAGACCGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC60080.12907461578388338No Hit
AAGACGGATGGGCCCTTGGTGGAGGTTGAAGAGACGGTGACCGTGGTCCC59550.12793597486568334No Hit
AAGACGGATGGGCCCTTGGTGGAGGCGTTAGAGACGGTGACCATTGTCCC52660.11313364292908287No Hit
AAGAGCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC52640.11309067534726401No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)