FastQCFastQC Report
Sat 10 Sep 2022
EGAF00001880434

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880434
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences912875
Sequences flagged as poor quality0
Sequence length251
%GC58

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCA462025.06115295084212No Hit
GACAAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGT378594.147227166917705No Hit
GACAAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGT345483.78452690675065No Hit
GACAAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGT290583.183130220457346No Hit
GACAAGACCGATGGGCCCTTGGTGGAGGCTGCACCACAGGCTCTGGCTGA278183.0472956319320827No Hit
GACAAGACCGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTG273832.9996439819252365No Hit
GACAAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGT265342.9066411063946322No Hit
GACAAGACCGATGGGCCCTTGGTGGAAGTTCCTGAAGTTCCCTTTTCTTC247372.7097904970560043No Hit
GACAAGACGGATGGGCCCTTGGTGGAGGCTGCACCACAGGCTCTGGCTGA229262.511406271395317No Hit
GACAAGACGGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTG228032.4979323565657947No Hit
GACAAGACGGATGGGCCCTTGGTGGAAGTTCCTGAAGTTCCCTTTTCTTC188062.0600848966178282No Hit
GACAAGACCGATGGGCCCTTGGTGGAAGCTGCTGTCCTTGGTCCTGGCTG176131.929398877173764No Hit
GACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGA160621.7594960974941805No Hit
GACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGA151051.6546624674791182No Hit
GACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGGAAAGGGAA144021.577653019307134No Hit
GACAAGACGGATGGGCCCTTGGTGGAAGCTGCTGTCCTTGGTCCTGGCTG141811.553443790223196No Hit
GACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGA138321.5152129261947145No Hit
GACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACGGTTA132431.4506914966452142No Hit
GACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACTGAGA107751.1803368478707381No Hit
GACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCCAAGACAGAGA102821.1263316445296454No Hit
GACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGTACGGTCA102331.1209639874024373No Hit
GACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACTGTGA78730.8624400931124196No Hit
GACAAGACCGATGGGCCCTTGGTGGAGGCTGTGGCTGCTCGGTCCTGGTA73120.8009858962070382No Hit
GACAAGACCGATGGGCCCTTGGTGGAAGCGAGGTGGGGGTCTCAGCCCTT70460.771847186087909No Hit
GACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACAGTGA63460.6951663699849376No Hit
GACAAGACGGATGGGCCCTTGGTGGAGGCTGTGGCTGCTCGGTCCTGGTA62820.688155552512666No Hit
GACAAGACCGATGGGCCCTTGGTGGAGGCTGTGGCTGCTTGGTCCTGGTA55750.6107079282486649No Hit
GACAAGACGGATGGGCCCTTGGTGGAAGCGAGGTGGGGGTCTCAGCCCTT53600.5871559633027523No Hit
GACAAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTAACCGTGGT51830.5677666712310009No Hit
GACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACGGTCA51740.5667807750239627No Hit
GACAAGACGGATGGGCCCTTGGTGGAGGCTGTGGCTGCTTGGTCCTGGTA43260.47388744351636314No Hit
NACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCA43170.47290154730932493No Hit
GACAAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTAACCGTGGT42990.4709297548952485No Hit
GACAAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACCGTGGT32950.3609475557989867No Hit
GANAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCA32130.35196494591263866No Hit
NACAAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGT31260.34243461591126934No Hit
GACAAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGT30160.3303847733808024No Hit
GACAAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACCGTGGT27810.3046419279748049No Hit
NACAAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGT27800.3045323839518006No Hit
GACAAGACCGATGGGCCCTTGGTGGAGGCCCAGAAAGCTTGCAGGACCGG25910.28382856360399833No Hit
NACAAGACCGATGGGCCCTTGGTGGAGGCTGCACCACAGGCTCTGGCTGA24900.2727646172805696No Hit
GANAAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGT24350.26673969601533615No Hit
NACAAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGT24280.26597288785430645No Hit
GACAAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGT24230.2654251677392852No Hit
GACAAGACCGATGGGCCCTTGGTGGAGGCGAGGTGGGGGTCTCAGCCCTT22960.25151307681774615No Hit
NACAAGACCGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTG22830.2500890045186909No Hit
GNCAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCA22070.24176365877036834No Hit
GACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGTCACAGTGA22060.2416541147473641No Hit
NACAAGACCGATGGGCCCTTGGTGGAAGTTCCTGAAGTTCCCTTTTCTTC22010.24110639463234287No Hit
GACAGCGACCTCGGGTGGGAACACCTTTTTCAGGTCCTCGAGCACTGTCA21710.23782007394221555No Hit
GANAAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGT21420.23464329727509245No Hit
GACAAGACGGATGGGCCCTTGGTGGAGGCCCAGAAAGCTTGCAGGACCGG21410.2345337532520882No Hit
NACAAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGT20830.22818019991784197No Hit
NACAAGACGGATGGGCCCTTGGTGGAGGCTGCACCACAGGCTCTGGCTGA20820.22807065589483777No Hit
GANAAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGT19570.21437765301930714No Hit
GANAAGACCGATGGGCCCTTGGTGGAGGCTGCACCACAGGCTCTGGCTGA18960.2076954676160482No Hit
NACAAGACGGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTG18710.2049568670409421No Hit
GNCAAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGT18090.1981651376146789No Hit
GANAAGACCGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTG17940.1965219772696152No Hit
NACAAGACGGATGGGCCCTTGGTGGAAGTTCCTGAAGTTCCCTTTTCTTC17810.19509790497056004No Hit
GACAAGACGGATGGGCCCTTGGTGGAGGCGAGGTGGGGGTCTCAGCCCTT17460.19126386416541147No Hit
GACAAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGT17440.191044776119403No Hit
GANAAGACCGATGGGCCCTTGGTGGAAGTTCCTGAAGTTCCCTTTTCTTC17260.18907298370532657No Hit
GACAAGACCGATGGGCCCTTGGTGGAGGCTGTGCTGGGGGAGCCTGGACT16760.18359578255511433No Hit
GNCAAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGT16460.180309461864987No Hit
GANAAGACGGATGGGCCCTTGGTGGAGGCTGCACCACAGGCTCTGGCTGA16380.17943310968095302No Hit
GANAAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGT16280.17833766945091056No Hit
GACAAGACCGATGGGCCCTTGGTGGAGGTTCCTGAAGTTCCCTTTTCTTC15490.16968369163357525No Hit
GANAAGACGGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTG15050.16486375462138847No Hit
NACAAGACCGATGGGCCCTTGGTGGAAGCTGCTGTCCTTGGTCCTGGCTG14630.1602629056552102No Hit
GACAAGACCGATGGGCCCTTGGTGGAAGCTGTGGCTGCTCTGCCCTGGTC14310.15675749691907434No Hit
GNCAAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGT13770.15084211967684513No Hit
GACAAGACGGATGGGCCCTTGGTGGAGGCTGTGCTGGGGGAGCCTGGACT13580.1487607832397645No Hit
GNCAAGACCGATGGGCCCTTGGTGGAGGCTGCACCACAGGCTCTGGCTGA13210.14470765438860742No Hit
GNCAAGACCGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTG13180.14437902231959468No Hit
NACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGA13000.14240722990551827No Hit
GANAAGACGGATGGGCCCTTGGTGGAAGTTCCTGAAGTTCCCTTTTCTTC12970.14207859783650553No Hit
NACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGA12750.13966862933041216No Hit
GACAAGACGGATGGGCCCTTGGTGGAGGTTCCTGAAGTTCCCTTTTCTTC12390.13572504450225933No Hit
GACAAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGT12260.13430097220320417No Hit
NACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGGAAAGGGAA12130.132876899904149No Hit
GNCAAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGT12100.13254826783513626No Hit
NACAAGACGGATGGGCCCTTGGTGGAAGCTGCTGTCCTTGGTCCTGGCTG11960.1310146515130768No Hit
GNCAAGACCGATGGGCCCTTGGTGGAAGTTCCTGAAGTTCCCTTTTCTTC11410.12498973024784336No Hit
GACAAGACGGATGGGCCCTTGGTGGAAGCTGTGGCTGCTCTGCCCTGGTC11370.12455155415582637No Hit
GANAAGACCGATGGGCCCTTGGTGGAAGCTGCTGTCCTTGGTCCTGGCTG11310.1238942900178009No Hit
GACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTCCAGGCACTG11170.12236067369574147No Hit
NACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACGGTTA11140.12203204162672873No Hit
GNCAAGACGGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTG11080.12137477748870326No Hit
NACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGA10840.11874572093660139No Hit
GNCAAGACGGATGGGCCCTTGGTGGAGGCTGCACCACAGGCTCTGGCTGA10660.116773928522525No Hit
GNNAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCA10150.11118718334930851No Hit
GANAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGA9630.10549089415308778No Hit
GACAAGACCGATGGGCCCTTGGTGGAAGCTCATTTTTGTTTTTGCAGCAC9620.10538135013008353No Hit
GANAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGA9590.10505271806107079No Hit
GNCAAGACGGATGGGCCCTTGGTGGAAGTTCCTGAAGTTCCCTTTTCTTC9290.10176639737094345No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)