FastQCFastQC Report
Sat 10 Sep 2022
EGAF00001880476

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880476
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences788186
Sequences flagged as poor quality0
Sequence length250
%GC54

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC8104010.281837028315651No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC420285.332243911970017No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC406155.15297150672557No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTGCC243933.0948278705787717No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGATTCC234412.974044197689378No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC213672.7109083388946265No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC211682.685660491305352No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTGCC127581.6186534650450528No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACTGCGGTCCC98091.2445032010210788No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGAGCC94401.197686840415841No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAGCC88351.120928308800207No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCC74390.943812754857356No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGACGAGACGGTGACCGTGGTCCC53910.6839756098179871No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGATTCC52370.6644370744976439No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC51620.6549215540494249No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACTGCGGTCCC50630.6423610670577757No Hit
AGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACTGTGAGTC50050.635002397911153No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGTACGGTCAGCC39530.5015313644241335No Hit
AAGACCGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCAGGGTCCC31000.3933081785263884No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGACGAGACGGTGACCGTGGTCCC28050.3558804647633934No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACTGTGACCAGGGTTCC26080.3308863643860713No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGCTTCC16780.21289391082815476No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC16020.20325151677395942No Hit
AAGACGGATGGGCCCTTGGTGGAGGCCGAGGAGACGGTGACCAGGGTCCC15970.20261714874407816No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGAGCC15570.197542204505028No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC14440.18320548702971126No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGCGACAAGGGCTCC13760.174578081823326No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAAACGGTGACCAGGGTTCC13530.1716599888858721No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACTGTGACCAGGGTTCC13320.16899564316037077No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGCTCC13020.16518943498108316No Hit
AAGACCGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC11240.14260593311730987No Hit
AGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTAGGATGGAGAGTC11120.14108344984559484No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC9520.12078367288939412No Hit
AAGACGGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC8360.10606633459614863No Hit
AAGACCGATGGGCCCATGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC8050.10213325281088474No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC8020.10175263199295598No Hit
AAGACGGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC7890.10010327511526468No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)