FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001880482

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880482
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1406106
Sequences flagged as poor quality0
Sequence length250
%GC53

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGGTGAGGAGACGGTGACCAGGGTTCC14238310.126050240878No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC919386.538482873979628No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC701514.989026431862179No Hit
AAGACGGATGGGCCCTTGGTGGAGGGTGAGGAGACGGTGACCAGGGTTCC635844.521991940863633No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC440493.1326941212113457No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCAGAGACGGTGACCATTGTTCC351742.501518377704099No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC340332.4203722905669984No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC186061.3232288319657266No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGCAGAGACGGTGACCATTGTTCC172921.2297792627298367No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAACGTTCC144171.0253138810303064No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGATTCGGGTTCC140480.9990711937791318No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCGGAGACGGTGACCAGAGTTCC127440.9063328084795883No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGCGGTCCC117180.833365336610469No Hit
AAGACCGATGGGCCCTTGGTGGAGGCAGAGGAAACGGTGACCAGGGTTCC113700.8086161356256214No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC91480.6505910649694974No Hit
AAGACCGATGGGCCCTTGGTGGAGGTTGAGGAGACGGTGACCAGGGTTCC86130.612542724374976No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAACGTTCC68030.48381843189631507No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGATTCGGGTTCC66550.47329290963839143No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGCGGAGACGGTGACCAGAGTTCC63830.45394870656977493No Hit
AAGACGGATGGGCCCTTGGTGGAGGCAGAGGAAACGGTGACCAGGGTTCC55930.3977651755984257No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGCGGTCCC55110.3919334673203869No Hit
AAGACGGATGGGCCCTTGGTGGAGGTTGAGGAGACGGTGACCAGGGTTCC37400.26598279219347615No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC32550.23149037128068578No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAGCC30850.21940024436280053No Hit
AAGACCGATGGGCCCTTGGTGGAGGCAGCGGAGACGGTGACCAGGGTTCC29660.21093715552028083No Hit
AAGACCGATGGGCCCTTGGTGGAGGCCGAGGAAACGGTGACCAGGGTTCC26670.18967275582352966No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGTACGGTCAGCC26090.18554788899272173No Hit
AAGACCGATGCGCCCTTGGTGGAGGGTGAGGAGACGGTGACCAGGGTTCC25090.17843604962925982No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTTCC23770.16904842166949008No Hit
AAGACCGATAGGCCCTTGGTGGAGGGTGAGGAGACGGTGACCAGGGTTCC22380.15916296495427798No Hit
AAGACCGATGGGCCCTTGGTGGAGGACGGTGAGGACGCTGACCACACGGT22280.15845178101793178No Hit
AAGACCGATGGGCCCATGGTGGAGGGTGAGGAGACGGTGACCAGGGTTCC18420.13100008107496874No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTGAGA18410.1309289626813341No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCC17650.12552396476510305No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC17440.12403047849877606No Hit
AAGACCGATGAGCCCTTGGTGGAGGGTGAGGAGACGGTGACCAGGGTTCC17110.1216835715088336No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCCAGCACTGAGAGCC16610.11812765182710265No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC16150.11485620571991016No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC16040.11407390338992936No Hit
AAGACGGATGGGCCCTTGGTGGAGGCAGCGGAGACGGTGACCAGGGTTCC15840.11265153551723696No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACTGTGGTCCC14990.10660647205829432No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC14660.10425956506835189No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)