FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001880493

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880493
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2044464
Sequences flagged as poor quality0
Sequence length250
%GC57

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC1761258.614727380868532No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCC1025875.017794395010135No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC942834.611624367071272No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTGAGA830224.060819853027493No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGAGCC761113.7227850429256764No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCACCACAGGCTCTGGCTGACTC464672.272820651280727No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTGAGA461262.2561414629947016No Hit
AGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACTGTGAGTC362371.7724450026999743No Hit
AAGACCGATGGGCCCTTGGTGGAGGCGAGGTGGGGGTCTCAGCCCTTCCT336651.6466418582083129No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGCACCACAGGCTCTGGCTGACTC276601.352921841617167No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGCACCACAGGCTCTGGCTGACTC259191.2677650474647635No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAGCC241901.1831952042197857No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC182270.8915295158046314No Hit
AAGACGGATGGGCCCTTGGTGGAGGCGAGGTGGGGGTCTCAGCCCTTCCT179810.8794970222023962No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGCACCACAGGCTCTGGCTGACTC165710.8105302905798293No Hit
AAGACGGATGGGCCCTTGGTGGAAGCGAGGTGGGGGTCTCAACCCTTCCT114610.5605870291675471No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGCTGTCCTTGGTCCTGGCTGAGA112730.5513914649512048No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC110090.5384785449878305No Hit
AGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTAGGATGGAGAGTC98960.4840388483240595No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC98900.4837453728703465No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGTGGCTGCTTGGTCCTGGTACCC88870.434686059524648No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGTGGCTGCTCGGTCCTGGTACCC61740.3019862418707299No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGCTGTCCTTGGTCCTGGCTGAGA61540.30100799035835313No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC59710.292056989020105No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGGATGGAGAGTC50370.24637264339210668No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGTGGCTGCTCGGTCCTGGTACCC50360.2463237308164878No Hit
AAGACCGATGGGCCCTTGGTGGAAGTTCCTGAAGTTCCCTTTTCTTCTGG49380.24153029840584136No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTATGTGCCCCTCCTGGATGAGCTC46090.22543806102724237No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGTGGCTGCTTGGTCCTGGTACCC44090.21565554590347397No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGAGCC43950.21497076984481017No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGGAAAGGGAAGAG35710.17466680753488445No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC33630.16449299180616533No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGTGGCTGCTCGGTCCTGGTACCC32200.15749849349267095No Hit
AAGACCGATGGGCCCTTGGTGGAAGCGAGGTGGGGGTCTCAGCCCTTCCT31800.15554199046791728No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCAACACAGGCTCTGGCTGACTC29340.14350949686568215No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC28830.14101495550912121No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCGAGGT27950.1367106488546631No Hit
AAGACCGATGGGCCCTTGGTGGAAGCGAGGTGGGGGTCTCAACCCTTCCT27210.13309111825886882No Hit
AAGACGGATGGGCCCTTGGTGGAAGCCTTGCCAACTGCTCAGTGGGATGG26780.13098787750725863No Hit
AAGACCGATGGGCCCTTGGTGGAAGGGGAGAAGGTGGGGAGCCCGGACCT26480.12952050023869338No Hit
AAGACGGATGGGCCCTTGGTGGAAGTTCCTGAAGTTCCCTTTTCTTCTGG23860.1167054054265568No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTATGTGCCCCTCCTGGATGAGCTC22860.1118141478646726No Hit
AAGACCGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC22800.11152067241095955No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)