FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001880495

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880495
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1076910
Sequences flagged as poor quality0
Sequence length250
%GC57

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC20423318.964723143066735No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC1064009.880119972885385No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGTGGCTGCTCGGTCCTGGTACCC265992.4699371349509245No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGATGACCAGGGTTCC135991.262779619466808No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGTGGCTGCTCGGTCCTGGTACCC117811.0939632838398752No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTAGCACGGTGAGCC97620.9064824358581497No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCTGTGACCGTGAGCC94100.8737963246696567No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACTGTCAGCC90560.84092449694032No Hit
AGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACTGTGAGTC81270.7546591637184166No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC73300.680651122192198No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGATGACCAGGGTTCC69680.6470364282994865No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGTGGCTGCTCGGTCCTGGTACCC62670.581942780733766No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGTGGCTGCTCGGTCCTGGTACCC62390.5793427491619542No Hit
AGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTGTCACAGTGAGCC60970.5661568747620507No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGCGACGGTGACCAGGGTTCC60230.5592853627508334No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGTGGCTGCTTGGTCCTGGTACCC56900.5283635587003556No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGCTCC45640.4238051462053468No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTATGTGCCCCTCCTGGATGAGCTC43500.4039334763350698No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC41540.38573325533238617No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGAGCTCC40590.37691171964230996No Hit
AGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTCTACAACGGTTAACC40260.37384739671838874No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC38470.35722576631287667No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC35760.3320611750285539No Hit
AGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTCGAGCACCAGGAGCC34790.32305392279763395No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCAGGGTTCC34230.3178538596540101No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGCGACGGTGACCAGGGTTCC32600.30271796157524766No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGTGGCTGCTTGGTCCTGGTACCC29090.2701247086571765No Hit
AAGACCGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC27510.25545310193052345No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGCTCC23920.22211698284907744No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTATGTGCCCCTCCTGGATGAGCTC23370.21700977797587542No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGAGCTCC22550.2093953998012833No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGACACGGTGACCAGAGTTCC21420.19890241524361368No Hit
AAGACGGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC20470.19008087955353742No Hit
AAGACCGATCGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC19970.18543796603244467No Hit
AAGACGGATGGGCCCTTGGTGGAAGCGAGGTGGGGGTCTCAACCCTTCCT19520.1812593438634612No Hit
AAGACGGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC18760.1742021153114002No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCAGGGTTCC17970.16686631194807366No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTCATTTTTGTTTTTGCAGCACTTG17640.16380198902415244No Hit
AAGACCGATGGGCCCTTGGTGGAGGCGAGGTGGGGGTCTCAGCCCTTCCT16930.15720905182420072No Hit
AAGACCGATGGGCCCATGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC16910.15702333528335702No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCTGTCCTTGGTCCTGGCTGAGA16900.15693047701293517No Hit
AAGAGCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC16740.1554447446861855No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCACCACAGGCTCTGGCTGACTC16590.15405187062985765No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGCAAGAGAGGTGGTGCCATGTGA16270.1510804059763583No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGATTCC16160.1500589650017179No Hit
AAGACCGATGGCCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC14850.13789453157645484No Hit
AAGACGGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC14790.13733738195392373No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGTGGCTGCTTGGTCCTGGTCCCT14780.13724452368350187No Hit
AAGACCGATGGACCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC14650.13603736616801776No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGATGAGACGATAACCGTGGTCCC14500.13464449211168994No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACAGTGACCAGGGTTCC13830.12842298799342564No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGCTGACCAGGGTTCC13740.12758726355962893No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC12770.11858001132870899No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGAGACCAGGGTTCC12600.11700142073153745No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGACACGGTGACCAGAGTTCC11650.10817988504146121No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)