FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001880512

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001880512
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4935925
Sequences flagged as poor quality0
Sequence length250
%GC53

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC84272517.073294266019033No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC4172218.452741887285564No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC3186806.456337971099642No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGTGGTCCC1612753.267371364030045No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGACGAGACGATGACCAGGGTCCC1138072.3056873838237006No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACCAGGGTTCC649991.3168555032744622No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGACGAGACGATGACCAGGGTCCC567321.1493691658605023No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGCTGACCAGGGTTCC323340.6550747833486125No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTTCC309290.6266100072428167No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC281900.5711188885568561No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC269640.54628058570582No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC249230.5049306867507103No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGAGTTCC245700.4977790383767987No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTTCC154100.3122008539432832No Hit
AAGACGGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCAGGGTTCC139390.2823989424474642No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAAGAGACGGTGACCATTGTCCC137310.27818494000617916No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGAATTCC131150.26570500969929645No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCGTGGTCCC126120.25551441725715035No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACAGCGACCAGGGTGCC124150.2515232707142025No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGGGGAGACGGTGACCAGGGTTCC123250.24969990427326183No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCAGGGTTCC123020.2492339328494659No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGAGTTCC120520.24416902606907517No Hit
AAGACCGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC106500.21576502884464413No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGACGAGACGCTGACCAGGGTCCC104780.21228037297973532No Hit
AAGACCGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC102500.20766117799601896No Hit
AAGACCGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC101550.2057365134194705No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGTGTTCC89290.1808982105684345No Hit
AAGAGCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC87960.17820368016126664No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTAACCGTGGTCCC68120.13800857995208599No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGATCC66350.13442262595156937No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGAATTCC65820.13334886571412652No Hit
AAGACCGATGGGCCCATGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC63740.12913486327284146No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTCCC62950.127534352730238No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGGGGAGACGGTGACCAGGGTTCC62720.12706838130644205No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACAGCGACCAGGGTGCC61770.12514371672989358No Hit
AAGACCGATGGACCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC60790.12315827327198042No Hit
AAGACCGATCGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC60680.12293541737364323No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGAGGAGACGATGACCAGGGTTCC60470.12250996520409042No Hit
AAGATCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC58520.11855933791538567No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCATGGTCCC57390.11627000005064907No Hit
AAGACCGATGGGCCCTTGGTGGAGACTGAGGAGACGGTGACCAGGGTTCC56380.11422377771137122No Hit
AAGACCGATGGGCCCTTGGTGGAAGCTGAGGAGACGGTGACCGTGGTCCC54910.11124561252450148No Hit
AAGACGGATAGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC53180.10774069703247112No Hit
AAGACGGATGGGCCCTTGGTGGAGGCTGACGAGACGCTGACCAGGGTCCC52420.10620096537123234No Hit
AAGACGGATGCGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC52220.10579577282880108No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCGGGGTCCC52100.10555265730334232No Hit
AAGACCGATGGGCCCTTGGTGGAGGCTGAGGAGACGGTGACCCGGGTCCC51460.10425604116756232No Hit
AAGACGGATGAGCCCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC50460.10223007845540602No Hit
AAGACCGATGGGACCTTGGTGGAGGCTGAGGAGACGGTGACCAGGGTTCC50070.10143995299766508No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)