FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001890790

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001890790
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1889281
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG22230.11766380967150995No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG19650.10400782096469502No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA19580.10363730964319232No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)