FastQCFastQC Report
Fri 10 Mar 2023
EGAF00001913249

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001913249
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65332034
Sequences flagged as poor quality0
Sequence length126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTT1025250.15692914137649533No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA744590.11397012375276727No Hit
CCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTT726260.11116445570943038No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)