FastQCFastQC Report
Sat 11 Mar 2023
EGAF00001913290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001913290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64112818
Sequences flagged as poor quality0
Sequence length126
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC804970.1255552360839918No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA724030.11293061552839559No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT669190.1043769437805713No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)