FastQCFastQC Report
Mon 6 Mar 2023
EGAF00001913353

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001913353
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64127353
Sequences flagged as poor quality0
Sequence length126
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAAGCTCATCAGTGGGGCCACGAGCTGAGTGCGTCCTGTCACTCCACT966770.15075782092549495No Hit
CCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTT707860.11038347396001205No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA680150.10606238495451388No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)