FastQCFastQC Report
Sat 25 May 2024
EGAF00001919571

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001919571
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64053165
Total Bases6.4 Gbp
Sequences flagged as poor quality0
Sequence length100-102
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCC1138020.17766803560760816No Hit
AGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGC671730.10487069608504124No Hit

[OK]Adapter Content

Adapter graph