FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001919604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001919604
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences18880867
Sequences flagged as poor quality0
Sequence length32
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCTGCGCGTATTTGTATGTTGGGGAGGGCG7332273.883439250962363No Hit
GATCAGCATGCCAGGCTCGGCTCCCCGTCATG498250.2638914833730887No Hit
GATCAACAACATGCTAAAGTTAAACAAGAAAA408620.21642014638416762No Hit
GATCCTCCCCTCTGCTTTTTATTGTAACCAGA402590.21322643711223643No Hit
GATCTGGAAACGAGTGTGCTCTCACTGCGTTC370570.19626747013259507No Hit
GATCCCACGGAATGGGAGCAACATAATACTTT307990.16312280574827417No Hit
GATCGCGAATTCGCTGGACCCGGAGACCCGAC305530.16181989947813308No Hit
GATCATGCCACCCAGTCATGGCAGACTTCCCC281750.1492251388667692No Hit
GATCCCTGGTTCTATTGGAAGAAATGGGGAGG278500.14750381960743644No Hit
GATCAATTTCAAACCCTGCTTATGATATGAAA269430.14270001478216016No Hit
GATCCTGGCTGTCTCTCCTGGGGACCAGGGAC245200.1298669176579656No Hit
GATCGCAGTTTGGAAACTCCGGCGGCTGCGTG242220.12828860030633127No Hit
GATCTTCTGTAATTTGTTTTAAAAAGAGATTG231220.12246259665935892No Hit
GATCTGTACCCTGCAGGTCCCGGCCCACGCAC229700.12165754888268637No Hit
GATCTCAGTCCCTGGCATGGAATGCACCTTGT195810.10370816128305972No Hit
GATCAGCAAAAGTCTATTTATGCTGGTGGACC194060.10278129706649594No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)