FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001963547

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001963547
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1553422
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT76030.489435581574099No Hit
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT71520.4604029040402415No Hit
ACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT69020.4443094020813404No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT41470.26695901049425075No Hit
CTTATACACATCTGACGCTGCCGACGATAAGGCTCGTGTAGATCTCGGTG25820.16621368823153013No Hit
ATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT23940.15411137475843653No Hit
TATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT17550.11297638375148543No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)