FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001963597

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001963597
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1133422
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT66240.5844248655840455No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT50860.4487295993901653No Hit
ACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT41930.36994164574183314No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT31140.2747432112664127No Hit
ATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT17410.15360562967720762No Hit
TATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12570.1109030881701608No Hit
GTACTTGTTCGCTATCGGTCTCTCGCCAGTATTTAGCCTTAGAAGGGATT12120.10693281055070397No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)