FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001982365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001982365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14653232
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT229960.15693466124060548No Hit
CGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGATCCGGGG170450.11632246046469476No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)