FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001982624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001982624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11428760
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCT149800.13107283729818459No Hit
CTCAGACAGGCGTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGA143030.12514918503844688No Hit
GTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGG126580.11075567253140324No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)