FastQCFastQC Report
Mon 5 Sep 2022
EGAF00001984203

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001984203
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13434991
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAGCATAGCACCTGCAGCAAGATGGATGTGGGCAGCAAAGAGGTCCTGA211800.15764804010661412No Hit
CTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAA150230.11181994837212769No Hit
AGTGGAACCACTGGCTTGGTGGATTTTGCTAGATTTTTCTGATTTTTAAA135190.10062530000950504No Hit
GTGGAACCACTGGCTTGGTGGATTTTGCTAGATTTTTCTGATTTTTAAAC134950.1004466620037185No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)