FastQCFastQC Report
Thu 23 Mar 2023
EGAF00001998396

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001998396
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69588857
Sequences flagged as poor quality0
Sequence length76
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC3376070.4851452007610931No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC3294950.4734881620487027No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC1521550.21864851149947756No Hit
GGCAGGGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTT1337520.192203185633585No Hit
ATCGCTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATC1254730.18030616597137095No Hit
ACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCT826750.11880494027944732No Hit
TACCTGGCAGGGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGA779760.1120524224158474No Hit
AGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCCCGAA714090.10261556674224438No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)