FastQCFastQC Report
Sun 8 Jan 2023
EGAF00001998426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001998426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65770152
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC4653670.7075656446711572No Hit
GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCC2739940.41659322909881674No Hit
GGCAGGGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTT2465980.3749390757071688No Hit
ATCGCTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATC2378330.3616123617898891No Hit
TACCTGGCAGGGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGA1458550.22176472999484628No Hit
GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCC1215020.1847372954223977No Hit
ACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCT1081220.16439372072608255No Hit
ACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCT901360.13704696926958598No Hit
ACCTGGCAGGGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAG815510.12399393572938679No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)