FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002000663

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002000663
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences386
Sequences flagged as poor quality0
Sequence length251
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA5915.284974093264248No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA348.808290155440414No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA287.253886010362693No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA235.958549222797927No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTA184.66321243523316No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCA92.33160621761658No Hit
AACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA92.33160621761658No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA71.8134715025906734No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA71.8134715025906734No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATGATTGGGCGTAAAGGGTGCGTA71.8134715025906734No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA61.5544041450777202No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA51.2953367875647668No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA51.2953367875647668No Hit
TACGGAGGGTGCAAGCGTTGTCCGGAATCATTGGGCGTAAAGAGTTCGTA51.2953367875647668No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA51.2953367875647668No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGTGCGCA51.2953367875647668No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA51.2953367875647668No Hit
CATACGAGATCTGATCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT51.2953367875647668TruSeq Adapter, Index 9 (100% over 49bp)
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA41.0362694300518136No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTACTGGGTGTAAAGGGTGTGTA41.0362694300518136No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA30.7772020725388601No Hit
TACGTAGGGGGCGAGCGTTGTCCGGAATGATTGGGCGTAAAGGGCGCGTA30.7772020725388601No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA30.7772020725388601No Hit
TACGTAGGTTGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTA30.7772020725388601No Hit
TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCA30.7772020725388601No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGTGCGCG30.7772020725388601No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCA30.7772020725388601No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATAACTGGGCGTAAAGGGCATGCA30.7772020725388601No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA20.5181347150259068No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTACAGGGAGCGCA20.5181347150259068No Hit
TACGGAAGGTCCAGGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA20.5181347150259068No Hit
TACGTAGGGGGTTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTA20.5181347150259068No Hit
TACGGAGGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.5181347150259068No Hit
TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTA20.5181347150259068No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGCA20.5181347150259068No Hit
TACGTAGGTGGCAGGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTA20.5181347150259068No Hit
TACTTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA20.5181347150259068No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATCATTGGGCGTAAAGAGGGAGCA20.5181347150259068No Hit
TACGGAAGGTTCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.5181347150259068No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGTGTA20.5181347150259068No Hit
TACGGAGGATCCGAGCGTTATCCGGATCTATTGGGTTTAAAGGGAGCGTA20.5181347150259068No Hit
TTCAGACGCGTGCTCTTCCGATCTGAGTGGAATTCAGGATTAGATACCCT20.5181347150259068Illumina Multiplexing PCR Primer 2.01 (95% over 24bp)
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGAGCGTA20.5181347150259068No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCATGTA20.5181347150259068No Hit
TACGGAAGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.2590673575129534No Hit
TGCGTAGGTGGCGAGCGTTGTTCGGATTTATTGGGCGTAAAGGGTCTGTG10.2590673575129534No Hit
AGCGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA10.2590673575129534No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATGACTGGGCGTAAAGGGAGCGTA10.2590673575129534No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGAGTGTAAAGGGAGCGTA10.2590673575129534No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGAGAGTA10.2590673575129534No Hit
GGATTAGAAACCCCAGTAGTCCGGCTGACTGACTACGCTACTATCTCGTA10.2590673575129534No Hit
TGCGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA10.2590673575129534No Hit
TGCGTAGGTGGCGAGCGTTGTTCGGATTATTGGGCGTAAAGGGTCTGTAG10.2590673575129534No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA10.2590673575129534No Hit
GCAGGATTAGAAACCCGTGTAGTCCGGCTGACTGACTACGCTACTATCTC10.2590673575129534No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGAGCGCAG10.2590673575129534No Hit
TACGTAGGTGGCAAGCGATATCCGGAATTACTGGGTGTAAAGGGAGCGTA10.2590673575129534No Hit
TACGGAAGTTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.2590673575129534No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGGGCGCGTA10.2590673575129534No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCATGTA10.2590673575129534No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGAGCGCA10.2590673575129534No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA10.2590673575129534No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGGGTAAAGGGAGCGTA10.2590673575129534No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGTGCGTA10.2590673575129534No Hit
ACTGGAGTTCAGACGTGTGCTCTTCCTATCTTGCGATGCAAAGGATTAGA10.2590673575129534Illumina Multiplexing PCR Primer 2.01 (96% over 31bp)
TATGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.2590673575129534No Hit
TACGTAGGGGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCA10.2590673575129534No Hit
GTGGAAAACAGGATTAGAAACCCTTGTAGTCCGGCTGACTGACTACGCTA10.2590673575129534No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA10.2590673575129534No Hit
TACGGAGGATCCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.2590673575129534No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTTAAAGGGCGCGTA10.2590673575129534No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCGTTGGGCGTAAAGCGCGCGTA10.2590673575129534No Hit
GTGGCGTGCAGGATTAGATACCCTGGTAGTCCGGCTGACTGACTACGCTA10.2590673575129534No Hit
TACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCA10.2590673575129534No Hit
TACGTAGGTGGCGAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGTGTA10.2590673575129534No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGCAAAGGGAGCGTA10.2590673575129534No Hit
TACGTAGGGGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGGGCGCGTA10.2590673575129534No Hit
TACGTAGGCGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGCA10.2590673575129534No Hit
TACGTAGGTGGCGAGCGTTATCAGGAATGATTGGGCGTAAAGGGTGCGTA10.2590673575129534No Hit
TACGTAGGTGGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGAGCGCA10.2590673575129534No Hit
ATTAGATACCCTGGTAGTCCGGCTGACTGACTACGCTACTATCTCGTATG10.2590673575129534No Hit
TACGGAAGATGCGAGCGTTATCAGGATTTATTGGGTTTAAAGGGAGCGTA10.2590673575129534No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCATGTA10.2590673575129534No Hit
TACGTAGGGAGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA10.2590673575129534No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTACTGGGCGTAAAGAGAGAGCA10.2590673575129534No Hit
TACGTAGGATGCAAGCGTTATCCGGAATGACTGGGCGTAAAGGGTGCGTA10.2590673575129534No Hit
TACGTAGGATGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA10.2590673575129534No Hit
TACGTAGGGAGCGAGCGTTATCCGGATTTATTGGGTGTAAAGGGTGCGTA10.2590673575129534No Hit
TACGTATGGGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGGGCGCGTA10.2590673575129534No Hit
TACGGAAGATGCGAGCGTTATCCGGATTTACTGGGTTTAAAGGGAGCGTA10.2590673575129534No Hit
TACGTAGGGGGTTAGCGTTATCCGGAATTACTGGGCGTAAAGGGCGCGTA10.2590673575129534No Hit
TACGTAGGGGGCGAGCGTTGTCCGGAATGACTGGGCGTAAAGGGCGTGTA10.2590673575129534No Hit
TACGTAGGGGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA10.2590673575129534No Hit
TACGTAAGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCATGTA10.2590673575129534No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGAGTA10.2590673575129534No Hit
GGATTAGAAACCCCTGTAGTCCGGCTGACTGACTACGCTACTATCTCGTA10.2590673575129534No Hit
TAAGGATTAGATACCCGAGTAGTCCGGCTGACTGACTACGCTACTATCTC10.2590673575129534No Hit
TACGGAAGGTCCGGGCGTTATCCGGATTTATTGGGTTCAAAGGGAGCGTA10.2590673575129534No Hit
TACGTATGGTGCGAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA10.2590673575129534No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGTA10.2590673575129534No Hit
GAAGTGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGGCATAGAGA10.2590673575129534Illumina Single End PCR Primer 1 (97% over 35bp)
CCGATCTGAGTGGAAGTAAGGATTAGAAACCCTTGTAGTCCGGCTGACTG10.2590673575129534No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCTCGCA10.2590673575129534No Hit
GGATTAGATACTCGAGTAGTCCGGCTGACTGACTACGCTACTATATCGTA10.2590673575129534No Hit
TACATAGGTGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA10.2590673575129534No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGTA10.2590673575129534No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGTA10.2590673575129534No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTACTGGGTGTCAAGGGTGTGTA10.2590673575129534No Hit
TACGTAGGTGGTAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA10.2590673575129534No Hit
TACGTAGGGGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGAGTGCA10.2590673575129534No Hit
TACGTAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.2590673575129534No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGAGTA10.2590673575129534No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGAGTGCGTA10.2590673575129534No Hit
TACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGGGCGCGTA10.2590673575129534No Hit
TACGTAGGTGGCATGCGTTGTCCGGAATGACTGGGCGTAAAGGGAGCGTA10.2590673575129534No Hit
GGATTAGAAACCCTTGTAGTCCGGCTGACTGACTACGCTACTATCTCGTA10.2590673575129534No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTATTGGGTGTAAAGGGTGCGTA10.2590673575129534No Hit
TACGGAAGGTCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA10.2590673575129534No Hit
TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCGCGTA10.2590673575129534No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGTGTA10.2590673575129534No Hit
TACGTAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.2590673575129534No Hit
CATACGAGATCTGATCGTGACTGGAGTTCAGACGTGTGCTCTTCGCGACT10.2590673575129534TruSeq Adapter, Index 9 (97% over 44bp)
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGTGTAAAGGGTGCGTA10.2590673575129534No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATGACTGGGTGTAAAGGGAGCGTA10.2590673575129534No Hit

[OK]Adapter Content

Adapter graph