FastQCFastQC Report
Thu 26 Jan 2023
EGAF00002004047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002004047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences120716266
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGAGGTGAAAGATGAGCTGGAGGACCGCAATAGGGGTAGGTCCCCTGTG2280040.18887595479469188No Hit
GTGAAAGATGAGCTGGAGGACCGCAATAGGGGTAGGTCCCCTGTGGAAAA2002590.16589230816665584No Hit
GGTGAGGTGAAAGATGAGCTGGAGGACCGCAATAGGGGTAGGTCCCCTGT1546950.12814760191472455No Hit
GTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTC1274440.10557317934270763No Hit
GTCTGCTTTGCTCAGCGTCAGGGTGCTGCTGAGGCTGTAGGTGCTGTCCT1231830.10204341476234859No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)