FastQCFastQC Report
Thu 23 Feb 2023
EGAF00002005482

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002005482
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72685273
Sequences flagged as poor quality0
Sequence length126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGAAGCTCATCAGTGGGGCCACGAGCTGAGTGCGTCCTGTCACTCCACT1471410.2024357809043381No Hit
CCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTT984520.13544972170634897No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)