FastQCFastQC Report
Mon 6 Mar 2023
EGAF00002005502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002005502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65144630
Sequences flagged as poor quality0
Sequence length126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTT751480.115355632536404No Hit
CCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTT732340.11241755460120043No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)