FastQCFastQC Report
Wed 22 Feb 2023
EGAF00002005514

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002005514
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66791579
Sequences flagged as poor quality0
Sequence length126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTT981570.14696014298449211No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA805140.12054513638613035No Hit
CCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTT716240.10723507524803388No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)