FastQCFastQC Report
Mon 8 May 2023
EGAF00002010302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002010302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89847489
Sequences flagged as poor quality0
Sequence length31
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAN1608950.17907567789679688No Hit
CCTCTGCAAAAAAAAAAAAAAAAAAAAAAAN1469640.16357051447481188No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN1446680.1610150729977551No Hit
CGGCCAAAAAAAAAAAAAAAAAAAAAAAAAN1218790.1356509807413761No Hit
CCTCTGCAATAAAAAAAAAAAAAAAAAAAAN1044070.11620469437938327No Hit
ATATGGGTGTAAAAAAAAAAAAAAAAAAAAN977640.10881105425216725No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)