FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002010321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002010321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23237454
Sequences flagged as poor quality0
Sequence length46
%GC34

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2447001.053041352981269No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1730910.7448793658720099No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1435140.6175977798600484No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT244800.10534716927250291No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)