FastQCFastQC Report
Wed 8 Feb 2023
EGAF00002018667

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002018667
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94477892
Sequences flagged as poor quality0
Sequence length76
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCC1173500.12420895250287761No Hit
TAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTA1147520.12145910283434351No Hit
TAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTA1047360.11085768086358234No Hit
CTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCT1032540.10928905992102364No Hit
GGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGG1010870.10699540163322017No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACC946790.10021286249697443No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)