FastQCFastQC Report
Mon 13 May 2024
EGAF00002024292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002024292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53109333
Total Bases8 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG1473430.27743334679047843Illumina Single End PCR Primer 1 (100% over 50bp)

[OK]Adapter Content

Adapter graph