FastQCFastQC Report
Fri 2 Sep 2022
EGAF00002025678

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002025678
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112376
Sequences flagged as poor quality0
Sequence length300
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG4050636.045063002776395No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG3176228.264042144230082No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG52494.670926176407774No Hit
AGAGTTTGATCCTGGCTCAGAGCGAACGCTGGCGGCAGGCCTAACACATG25002.2246743076813553No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG22612.011995443867018No Hit
AGAGTTTGATCCTGGCTCAGTGTGCCAGCAGCCGCGGTAAAGACCAAGTC16501.4682850430696945No Hit
AGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCAGGCCTCAAACATG13451.1968747775325692No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCCTTACACATG11050.9833060439951592No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG10740.9557200825799103No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCATGCCTAATACATG9180.8169004057805938No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATG9010.8017726204883604No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATG3750.3337011461522033No Hit
AGAGTTTGATCCTGGCTCAGAATGAACGTTGGCGGCGTGGATTAGGCATG3270.2909873994447213No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATG3000.26696091692176266No Hit
AGAGTTTGATCCTGGCTCGGGATGAACGCTGGCGGCGTGCCTAATACATG2660.2367053463372962No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGAGTGCCTAACACATG2420.2153484729835552No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCATGCCTAATACATG2030.18064355378372604No Hit
AGAGTTTGATCCTGGCTCGGGACGAACGCTGGCGGCGTGCCTAATACATG1990.1770840748914359No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACACG1900.16907524738378302No Hit
AGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCATGCCTAATACATG1860.16551576849149283No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCCGGCGGTGTGCCTAATACATG1800.1601765501530576No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACGTG1730.1539474620915498No Hit
AGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCGTGCCTAATACATG1730.1539474620915498No Hit
AGAGTTTGATCCTGGCTCAGGGCGAACGCTGGCGGCGTGCCTAATACATG1700.15127785292233217No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACACG1620.14415889513775185No Hit
AGAGTTTGATCCTGGCTCAGAGTGAACGCTGGCGGTAGGCCTAACACATG1610.14326902541467929No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGACGTGCTTAACACATG1530.13615006763009896No Hit
AGAGTTTGATCCTGGCTCAGGATGAGCGCTGGCGGCGTGCCTAATACATG1460.12992097956859117No Hit
AGAGTTTGATCCTGGCTCAGTGTGCCAGCAGCCGCGGTAGAGACCAAGTC1450.12903110984551863No Hit
AGAGTTTGATCCTGGCTCAGGGTGAACGCTGGCGGCGTGCCTAATACATG1400.12458176123015591No Hit
AGAGTTTGATCCTGGCTCAGAATGAACGCTGGCGGCGTGCCTAATACATG1400.12458176123015591No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGTCTAATACATG1360.12102228233786573No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCCGGCGGCGTGCCTAATACATG1340.11924254289172065No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCCAATACATG1330.1183526731686481No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGACGGCGTGCCTAATACATG1310.11657293372250303No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCCGGCGGCGTGCCTAATACATG1220.10856410621485015No Hit
AGAGTTTGATCCTGGCTCAGGACGAGCGCTGGCGGCGTGCCTAATACATG1190.10589449704563252No Hit
AGAGTCTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG1180.10500462732255997No Hit
AGAGTTTGATCCTGGCTCAGGATGGACGCTGGCGGCGTGCCTAATACATG1160.10322488787641489No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGCGCCTAATACATG1160.10322488787641489No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAATACATG1130.10055527870719727No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)