FastQCFastQC Report
Fri 2 Sep 2022
EGAF00002025694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002025694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences148610
Sequences flagged as poor quality0
Sequence length300
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATG9441263.53004508444923No Hit
AGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCATGCCTAATACATG90976.121391561806069No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATG63374.264181414440482No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACATG40152.701702442635085No Hit
AGAGTTTGATCCTGGCTCAGAGTGAACGCTGGCGGTAGGCCTAACACATG33222.235381199111769No Hit
AGAGTTTGATCCTGGCTCAGAGCGAACGCTGGCGGCAGGCCTAACACATG13140.8841935266805733No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCCTAACACATG11470.7718188547204091No Hit
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATG5320.3579839849269901No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCGGGCCTAACACATG5280.3552923760177646No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATG5120.34452594038086265No Hit
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATG5000.3364511136531862No Hit
AGAGTTTGATCCTGGCTCAGATCGAACGCTGGCGGCAGGCCTAACACATG4720.3176098512886078No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAATACATG4640.3122266334701568No Hit
AGAGTTTGATCCTGGCTCAGGTTGAACGCTGGCGGCAGGCCTAACACATG4210.28329183769598276No Hit
AGAGTTTGATCCTGGCTCAGATTGAGCGCTGGCGGCAGGCCTAACACATG3400.22878675728416664No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACACG3180.21398290828342645No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACGCATG3100.20859969046497545No Hit
AGAGTTTGATCCTGGCTCAGATTGGACGCTGGCGGCAGGCCTAACACATG2960.1991790592826862No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACGTG2860.1924500370096225No Hit
AGAGTTTGATCCTGGCTCAGAATGAACGCTGGCGGCAGGCCTAACACATG2840.19110423255500975No Hit
AGAGTTTGATCCTGGCTCAGACTGAACGCTGGCGGCAGGCCTAACACATG2810.18908552587309063No Hit
AGAGTTTGATCCTGGCTCGGATTGAACGCTGGCGGCAGGCCTAACACATG2750.1850481125092524No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGTAGGCCTAACACATG2720.1830294058273333No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCCTAATACATG2690.18101069914541418No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCCGGCGGCAGGCCTAACACATG2370.15947782787161024No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCCAACACATG2270.15274880559854653No Hit
AGAGTTTGACCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATG2120.14265527218895097No Hit
AGAGTTCGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATG2110.14198236996164457No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAGCACATG2070.13929076105241908No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATG2000.13458044546127448No Hit
AGAGTTTGATCCTGGCTCAGAGTGAACGCTGGCGGCAGGCCTAACACATG1980.1332346410066617No Hit
AGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCATGCCTAACACATG1910.12852432541551712No Hit
AGAGTTTGATCCTGGCCCAGATTGAACGCTGGCGGCAGGCCTAACACATG1820.12246820536975978No Hit
GGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATG1770.11910369423322792No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTCACACATG1770.11910369423322792No Hit
GAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGC1710.11506628086938968No Hit
AGAGTCTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATG1700.11439337864208332No Hit
AGAGTTTGATCCCGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATG1690.11372047641477694No Hit
AGAGCTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATG1610.10833725859632594No Hit
AGGGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATG1540.10362694300518134No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACCCATG1530.10295404077787498No Hit
AGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCGTGCCTAATACATG1510.10160823632326223No Hit
CGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATG1500.10093533409595584No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)