FastQCFastQC Report
Sun 12 May 2024
EGAF00002035786

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002035786
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59694993
Total Bases3 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCCCAATACGGAGAGAAGAACGATCATCAATGGCTGACGGCAGTTGCA902840.15124216531862228No Hit
CCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCATCA630010.10553816464975548No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)