FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002035827

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002035827
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63717628
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG964250.15133174762877238No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA861640.13522788387540102No Hit
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG669810.10512161563829714No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)