FastQCFastQC Report
Tue 6 Sep 2022
EGAF00002036085

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002036085
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118604457
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA1718650.14490602153340662No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG1468160.12378624186104574No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)