FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002036122

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002036122
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66679157
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT1623630.24349887926747482No Hit
GTAGTGGTTGTGCAGAGCCTCATGCATCACGGAGCATGAGAAGACGTTCCC799190.1198560443708069No Hit
CTCAACTTTCTTGTCCACCTTGGTGTTGCTGGGCTTGTGATTCACGTTGCA692160.10380455169821659No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)