FastQCFastQC Report
Tue 14 Feb 2023
EGAF00002041421

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002041421
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80801391
Sequences flagged as poor quality0
Sequence length18-150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1625800.20120940739745433No Hit
CATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGGCTGGC1289580.15959873760094057No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT1165360.14422523988479355No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)