FastQCFastQC Report
Tue 7 Feb 2023
EGAF00002041483

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002041483
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences124111333
Sequences flagged as poor quality0
Sequence length18-150
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGGCTGGC1968860.1586366008976795No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT1384420.11154662241843781No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1353420.10904886502185905No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)