FastQCFastQC Report
Fri 24 Mar 2023
EGAF00002044406

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002044406
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55601520
Sequences flagged as poor quality0
Sequence length126
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTC688950.12390848307744105No Hit
CAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAA596510.10728303830542761No Hit
GCAGAATCCAGATGCTCAAGGCCCTTCATAATATCCCCCAGTTTAGTAGT584390.10510324178187934No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)