FastQCFastQC Report
Tue 13 Sep 2022
EGAF00002050138

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002050138
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4896616
Sequences flagged as poor quality0
Sequence length125
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG212570.4341161324473881Illumina Single End PCR Primer 1 (100% over 50bp)
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN54740.11179149028635285No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)