FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002050292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002050292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5130805
Sequences flagged as poor quality0
Sequence length0-125
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
632721.2331788091732194No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN227780.44394593051187875No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)