FastQCFastQC Report
Sun 11 Sep 2022
EGAF00002050483

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002050483
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences10521341
Sequences flagged as poor quality0
Sequence length1-125
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
N5361795.096108946568693No Hit
C485210.46116745004272747No Hit
G296550.2818557064161308No Hit
T283640.2695854074114697No Hit
CC188310.17897908641113333No Hit
A160310.15236650917406822No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)