FastQCFastQC Report
Sun 11 Sep 2022
EGAF00002050484

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002050484
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences10521341
Sequences flagged as poor quality0
Sequence length1-125
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
N10271029.76208260905145No Hit
C537040.5104292314069091No Hit
T331300.31488381566570267No Hit
G301560.2866174568431914No Hit
CC179800.1708907638294396No Hit
A159210.15132101506832638No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)