FastQCFastQC Report
Sat 10 Sep 2022
EGAF00002050719

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002050719
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences854706
Sequences flagged as poor quality0
Sequence length35-301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATATATATATATATATATATATATATATATATATATATATATATATAT41270.4828560932063189No Hit
TATATATATATATATATATATATATATATATATATATATATATATATATA39550.46273221435206957No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN23790.2783413243852272No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)