FastQCFastQC Report
Tue 13 Sep 2022
EGAF00002050784

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002050784
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5528881
Sequences flagged as poor quality0
Sequence length0-125
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN251920.4556437369514736No Hit
174450.31552496789133283No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)