FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002050950

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002050950
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5059401
Sequences flagged as poor quality0
Sequence length0-125
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
278110.5496895778769068No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN230040.4546783304980174No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)