FastQCFastQC Report
Mon 12 Sep 2022
EGAF00002051088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002051088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4290551
Sequences flagged as poor quality0
Sequence length0-125
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
265200.6181024302006898No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN195830.45642156450302074No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)