FastQCFastQC Report
Sun 4 Sep 2022
EGAF00002057802

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002057802
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences753806
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCAAACCACCATGGCACATGGTCATAGCTGTTTCCTGTGTGTCAAGTAT44650.5923274688713012No Hit
GCAAACCACCATGGCACATGGTCATAGCTGTTTCCTGTGTGTCAAGTATC17270.22910404003152005No Hit
TGCAAACCACCATGGCACATGGTCATAGCTGTTTCCTGTGTGTCAAGTAT12040.1597227933977708No Hit
TAGCAAACCACCATGGCACATGGTCATAGCTGTTTCCTGTGTGTCAAGTA10810.14340559772673606No Hit
CAGCAAACCACCATGGCACATGGTCATAGCTGTTTCCTGTGTGTCAAGTA9040.11992475517573487No Hit
GGCAAACCACCATGGCACATGGTCATAGCTGTTTCCTGTGTGTCAAGTAT9010.1195267747935145No Hit
GAGCAAACCACCATGGCACATGGTCATAGCTGTTTCCTGTGTGTCAAGTA8580.1138223893150227No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)