FastQCFastQC Report
Sun 5 Mar 2023
EGAF00002063546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002063546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62077013
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6484461.0445831212916126No Hit
CCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1036910.16703606534676532No Hit
CCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT889400.14327364623681232No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)