FastQCFastQC Report
Fri 24 Mar 2023
EGAF00002067322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002067322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88064964
Sequences flagged as poor quality0
Sequence length75
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGAGTTCCATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA2909740.33040835626753906Illumina Paired End PCR Primer 2 (97% over 37bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)